Download the predictions


Download Files

Predictor Description File
Pathogenicity Pathogenic predictions of all non-synonymous variants of NeoVar in TSV format

Download REST API

List of proteins

Proteins predicted by NeoVar predictor


    import requests
    r = requests.get('https://www.biotoclin.org/predictor/NeoVar/api/')
    r.json()
        

    curl  --request GET --url 'https://www.biotoclin.org/predictor/NeoVar/api/'
        

    wget -q 'https://www.biotoclin.org/predictor/NeoVar/api/' -O - 
        

Predictions of a protein variants

Pathogenicity predictions of all non-synonymous variants of a protein


    import requests
    r = requests.get('https://www.biotoclin.org/predictor/NeoVar/api/<protein>/')
    r.json()
 

    curl  --request GET --url 'https://www.biotoclin.org/predictor/NeoVar/api/<protein>/'
  

    wget -q 'https://www.biotoclin.org/predictor/NeoVar/api/<protein>/' -O - 
  

The parameter is:

  • protein: the HGNC identifier of the protein such as ASL. The list of available proteins can be downloaed in the section "List of proteins"

Prediction of a single variant

Pathogenicity prediction of a non-synonymous variant of a protein


    import requests
    r = requests.get('https://www.biotoclin.org/predictor/NeoVar/api/<protein>-<variant>/')
    r.json()
 

    curl  --request GET --url 'https://www.biotoclin.org/predictor/NeoVar/api/<protein>-<variant>/'
  

    wget -q 'https://www.biotoclin.org/predictor/NeoVar/api/<protein>-<variant>/' -O - 
  

The parameters:

  • protein: the HGNC identifier of the protein such as ASL. The list of available proteins can be downloaed in the section "List of proteins"
  • variant: non-synonymous variant in one letter format, that is, if your first residue has mutated from a methionine (M) to a alanine (A), the variant will be M1A

License

ShareAlike License

NeoVar predictor data is licensed under a
Creative Commons Attribution-ShareAlike 4.0 International License

Disclaimer This resource is uniquely intended for research purposes. The authors are not responsible for neither its use nor misuse. The data provided are not intended as advice of any kind. The authors have worked with care in the development of this server, but assume no liability or responsibility for any error, weakness, incompleteness or temporariness of the resource and of the data provided.