Download the predictions

Files

Predictor	Description	File
Pathogenicity	Pathogenic predictions of all missense variants of NeoVar in TSV format

REST API

List of proteins

Proteins predicted by NeoVar predictor


    import requests
    r = requests.get('https://www.biotoclin.org/predictor/NeoVar/api/')
    r.json()


    curl  --request GET --url 'https://www.biotoclin.org/predictor/NeoVar/api/'


    wget -q 'https://www.biotoclin.org/predictor/NeoVar/api/' -O -

Predictions of a protein variants

Pathogenicity predictions of all missense variants of a protein


    import requests
    r = requests.get('https://www.biotoclin.org/predictor/NeoVar/api/<protein>/')
    r.json()


    curl  --request GET --url 'https://www.biotoclin.org/predictor/NeoVar/api/<protein>/'


    wget -q 'https://www.biotoclin.org/predictor/NeoVar/api/<protein>/' -O -

The parameter is:

protein: the HGNC identifier of the protein such as ASL. The list of available proteins can be downloaded in the section "List of proteins"

Prediction of a single variant

Pathogenicity prediction of a missense variant of a protein


    import requests
    r = requests.get('https://www.biotoclin.org/predictor/NeoVar/api/<protein>/<variant>/')
    r.json()


    curl  --request GET --url 'https://www.biotoclin.org/predictor/NeoVar/api/<protein>/<variant>/'


    wget -q 'https://www.biotoclin.org/predictor/NeoVar/api/<protein>/<variant>/' -O -

The parameters:

protein: the HGNC identifier of the protein such as ASL. The list of available proteins can be downloaded in the section "List of proteins"
variant: missense variant in one letter format, that is, if your first residue has mutated from a methionine (M) to an alanine (A), the variant will be M1A

License

NeoVar predictor data is licensed under a
Creative Commons Attribution-ShareAlike 4.0 International License

Disclaimer This resource is uniquely intended for research purposes. The authors are not responsible for neither its use nor misuse. The data provided are not intended as advice of any kind. The authors have worked with care in the development of this server, but assume no liability or responsibility for any error, weakness, incompleteness or temporariness of the resource and of the data provided.